Sequences of the duplication boundaries.

<p>(A) 100 bp of 38M07 sequences flanking the left side of Box A–B and the right side of Box C–D. Black arrows indicate an 8 bp inverted repeat at sites A and D. (B) 100 bp of 38M07 sequences flanking Box E–F. Red letters indicate an <i>Expander</i> LINE, shown in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029477#pone.0029477.s005" target="_blank">Figure S5</a>. Boxes A–B, C–D, and E–F correspond to those of <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029477#pone-0029477-g005" target="_blank">Figures 5</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029477#pone-0029477-g007" target="_blank">7</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029477#pone.0029477.s003" target="_blank">S3</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029477#pone.0029477.s004" target="_blank">S4</a> and <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029477#pone.0029477.s005" target="_blank">S5</a>.</p>