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Partial dependence plots of most important variables.

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posted on 2015-04-24, 03:14 authored by Jonathan D. Tonkin, Deep Narayan Shah, Mathias Kuemmerlen, Fengqing Li, Qinghua Cai, Peter Haase, Sonja C. Jähnig

Partial dependence plots showing fitted functions of each of the top five influential variables contributing to each of the four boosted regression tree models not including latitude predicting Ephemeroptera (E), Plecoptera (P), Trichoptera (T) and combined EPT richness from environmental variables in streams across mid-latitude China. Y-axis values represent the model outcome in relation to the given independent variable, after considering the average effect of other independent variables in the model. For consistency between all independent variables, influence values have been scaled to have a mean = 0 and standard deviation = 1. Percentages given in parentheses next to variable names are the relative influence on the model. Rugs along the x-axis represent the data points. Climate variables: purple; land cover variables: grey; physical variables: green. Explanations and units of variables are given in Table 1. Note temperature values are in °C x 10.

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