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Non-random distribution of Meishan versus WC differentially expressed genes along the X-chromosome.

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posted on 2013-01-31, 02:10 authored by Steve R. Bischoff, Shengdar Q. Tsai, Nicholas E. Hardison, Alison A. Motsinger-Reif, Bradley A. Freking, Dan J. Nonneman, Gary A. Rohrer, Jorge A. Piedrahita

A bubble plot is depicted for the swine X chromosome (SSCX) in which physical coordinates are plotted (abscissa, x-axis) against sign-ranked –log10(p-values) (ordinate, y-axis). Estimate values from the linear mixed model were used to calculate positive (Meishan) or negative (WC) signs. Each bubble represents a specific probe set printed on the short-oligonucleotide array.

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