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Maximum likelihood phylogenetic tree based on 173 complete RABV N gene nucleotide sequences.

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posted on 2013-11-21, 04:41 authored by Ganesh R. Pant, Rachel Lavenir, Frank Y. K. Wong, Andrea Certoma, Florence Larrous, Dwij R. Bhatta, Hervé Bourhy, Vittoria Stevens, Laurent Dacheux

Branches are labeled with bootstrap values generated with both the neighbor-joining (1,000 bootstrap replications) and maximum likelihood (100 bootstrap replications, number in brackets) algorithms. Bootstrap values are given for selected relevant nodes only. A scale indicating genetic distance is presented by the horizontal bar. Designations of the different RABV phylogroups (clade, sub-clade and lineage) are as indicated, based on previously defined assignments [5], [25]. Isolates for which the complete N gene sequence was obtained in this study are indicated by an asterisk with the viruses from Nepal underscored.

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