Localization of proteins and DNA elements in 9F13 – 10B3 region of nonpolytene chromosomes (according to data of modENCODE).
The positions of proteins were located as described in Material and Methods. A - physical map of DNA; positions of v and sev genes are taken from FlyBase, arrows 1–4 indicate position of probes for FISH on physical map. B - P-elements density in the region calculated as number of insertions per 1 kb in 10 kb interval (data on insertions are taken from FlyBase) C - interband specific and active chromatin specific proteins in S2 cells [48], D - DNase I hypersensitivity sites (DHS) in S2, BG3 and Kc cells [48] E - ORC2-binding sites in S2, BG3 and Kc cultural and salivary gland cells [59] F - histone H1 dips localization in Kc cells [45] G - histone H3.3 localization in S2 cells (modENCODE, Henikoff group) H - 30 chromatin states in BG3 and S2 cells [48], and 5 chromatin types in Kc cells [47] I - nucleosome turnover dynamics in S2 cells [60], J - D1 localization in Kc cells [47], K - SUUR localization in Kc cells [47], L - Lamin localization in Kc cells [47] M - early (up) and late (down) replication in S2, Kc and BG3 cells [61] N - gene density (number of genes per 10 kb of DNA) [54].