Figure S1 - Imaging of an Inflammatory Injury in the Newborn Rat Brain with Photoacoustic Tomography

Framewise indices of data quality. The dotted line in insets A and B represents the threshold to signal suspect frames: (A) Framewise displacement (FD) of head position and (B) DVARS measure. All frames surpassing the threshold in FD and DVARS time courses are flagged, generating a temporal mask: (C)Frames flagged as having a FD>0.001 mm and (D)Frames flagged as having a DVARS>3000. These temporal masks are augmented by also marking 1 frame back and 2 frames forward to accommodate temporal smoothing of PAT data: (E) Augmented FD mask and (F) Augmented DVARS mask. (G) Temporal mask comprised of the intersection of E and F.

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