Fig_3.tif (1.03 MB)
Haplotype analysis for main loci associated with PUE on chromosomes 1 (A), 4 (B), 11 (C), and 12 (D).
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posted on 2015-04-29, 04:28 authored by Matthias Wissuwa, Katsuhiko Kondo, Takuya Fukuda, Asako Mori, Michael T. Rose, Juan Pariasca-Tanaka, Tobias Kretzschmar, Stephan M. Haefele, Terry J. RoseWithin haplotypes most significant SNPs highlighted in bold print and average PUE values of accessions belonging to respective haplotype are given. SNP alleles improving PUE are highlighted in green while negative alleles are highlighted grey. Linkage blocks for the respective subpopulation are indicated in blue above the haplotypes (see S5 Fig for details on LD analysis).
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expression patternsInternal Phosphorus Utilization EfficiencyUnmasking Novel Locichromosome 11.chromosome 1 haplotypeRice Germplasmexpression analysisP uptakecoding regionsGWASpriority candidate genesplant P uptakegenotypic variationrice gene poolfertilizer price increasesInternal P utilization efficiencyrice varietiesplant growthPUEhydroponic systemchromosome 1
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