Genotype distribution among HAD (cases) and non-HAD (controls) HIV-1-infected patients for all polymorphisms tested.


Polymorphisms selected from earlier studies that tested for association between genotype and HAD.


In the case of APOE AA, AB and BB refer to no APO E4, one APO E4 allele and two APO E4 alleles, respectively.


SNPs selected from a previous study that found associations between these SNPs and HIV-1 replication in macrophages.

*Significant difference after correction for multiple testing (n = 12); Bonferroni threshold p = 4.2×10−3.