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FlyGUI: editing mask details.

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posted on 2013-02-19, 22:33 authored by Anton Crombach, Damjan Cicin-Sain, Karl R. Wotton, Johannes Jaeger

Screenshot displaying the ‘Mask Details’ tab of our FlyGUI. This tab is used for embryo re-orientation, staging, and quality control for the segmentation process. Different embryo images are displayed by clicking on the curved direction arrows (shown in A–E). (A,B) Intermediate images generated after the ‘edge detection’ and ‘fill holes’ operations in the processing pipeline. (C–E) Cropped and rotated DIC, bright-field, and nuclear counterstain images. (F) Pop-out high-resolution image of membrane morphology. See text for details.

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