Figure 6

2012-12-27T01:54:29Z (GMT) by Benjamin J. Raphael

(Top) A discordant pair (arc) indicates a deletion with unknown breakpoints and located in orange blocks. Positions , and the minimum and maximum length of end-sequenced fragments constrain breakpoints to lie within the indicated orange blocks, and are governed by the indicated linear inequalities. (Bottom) A polygon in 2D genome space expresses the linear dependency between breakpoints and and records the uncertainty in the location of the breakpoints.