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Average structures of the p53-DNA complex over the last 5 ns of the Lys120 and Arg280 binding sites.

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posted on 2010-08-05, 02:03 authored by Yongping Pan, Ruth Nussinov

Lys120 and Arg280 are colored in cyan and the 2nd and 4′th bases are colored based on atom type. Hydrogen bonds formed between Lys120 and the 2nd base or between Arg280 and the 4′th base are shown in dotted yellow lines. The RE and its sequence for each selected structure are also listed on top of each panel. The calculations were performed with the CHARMm analysis module COOR DYNAMICS.

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