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Transcriptome characterization of the Olympia oyster and pinto abalone

dataset
posted on 2013-02-11, 16:02 authored by Steven RobertsSteven Roberts, Emma Timmins-SchiffmanEmma Timmins-Schiffman

Transcriptome information for the Olympia oyster and pinto abalone. 

Data S1. Ostrea lurida transcriptome. Assembled contigs of O. lurida transcriptome sequencing.

Data S2. Haliotis kamtschatkana transcriptome. Assembled contigs of H. kamtschatkana sequencing.

Data S3. Ostrea lurida SPIDs. BLASTx results for O. lurida contig search against the UniProtKB/Swiss-Prot database. BLAST e-values and gene descriptions are also given.

Data S4. Ostrea lurida GO. Gene Ontology annotations of O. lurida contigs. GO annotations are made based on associations with a Swiss-Prot ID.

Data S5. Haliotis kamtschatkana SPIDs. BLASTx results for H. kamtschatkana contig search against the UniProtKB/Swiss-Prot database. BLAST e-values and gene descriptions are also given.

Data S6. Haliotis kamtschatkana GO. Gene Ontology annotations of H. kamtschatkana contigs. GO annotations are made based on associations with a Swiss-Prot ID.

Data S7. Ostrea lurida bitscores. Bit scores for BLASTn results of O. lurida contigs against species-specific databases of other closely related species.

Data S8. Haliotis kamtschatkana bitscores. Bit scores for BLASTn results of H. kamtschatkana contigs against species-specific databases of other closely related species.

Data S9. Ostrea lurida SNPs. SNP information for putative SNPs identified in the O. lurida transcriptome. Contig numbers are listed in the leftmost column, followed by SNP location and allele. Annotations of the contigs, as determined through a BLASTx against the UniProtKB/Swiss-Prot database, are given along with the e-value for the BLAST result.

Data S10. Haliotis kamtschatkana SNPs. SNP information for putative SNPs identified in the H. kamtschatkana transcriptome. Contig numbers are listed in the leftmost column, followed by SNP location and allele. Annotations of the contigs, as determined through a BLASTx against the UniProtKB/Swiss-Prot database, are given along with the e-value for the BLAST result.

 

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