Reproduce-resbaz.pdf (5.06 MB)
Towards reproducible computational biology
Slides from my seminar and hands-on session at the Research Bazaar (ResBaz) conference June 2018 about how to achieve reproducibility in computational biology / bioinformatics analyses. I discussed life sciences package managers, isolated software environments with conda, workflow management with Snakemake, and containerization with Singularity and how to integrate everything into a consistent analysis workflow. The tutorial is available at: https://reproducible.sschmeier.com