Fig 7.TIF (436.67 kB)
The workflow of the first phase in GHOSTZ-GPU.
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posted on 2016-08-02, 17:30 authored by Shuji Suzuki, Masanori Kakuta, Takashi Ishida, Yutaka AkiyamaThe workflow of the first phase in GHOSTZ-GPU.
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evaluation testdatabase size1 GPUmetagenomic dataprotein sequencesDatabase Subsequence Clustering Sequence homology searchesoptimized memory accessGPU calculationsGHOSTZ3 GPUscomputation time12 CPU threadsSequence Homology Searchesgraphics processing unitsmetagenomic analysishomology search algorithm
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