Single-cell RNA-seq data from microfluidic emulsion

dataset

posted on 2017-12-19, 23:52 authored by The Tabula Muris Consortium

Gene-count files and metadata files for single cells from different organs of mice processed on the 10X Genomics Platform. The counts are given using the .mtx file output by the CellRanger program, with one folder per run.

Includes data for 422,803 droplets, 55,656 of which passed a QC cutoff of 500 genes and 1000 UMI.

Cell annotations using the Cell Ontology [1] controlled vocabulary are in a separate csv.

[1] http://purl.obolibrary.org/obo/cl.owl

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Single cell RNA-seq Mus musculus musculus mouse Animal Cell and Molecular Biology Cell Biology Bioinformatics Molecular Biology

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CC BY 4.0

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