SI2:SSE: Collaborative Research: Integrated Tools for DNA Nanostructure Design and Simulation
presentationposted on 05.02.2020 by Tural Aksel, Nick Fong, Christopher Maffeo, Aleksei Aksimentiev, Shawn Douglas
Academic presentations can be uploaded in their original slide format. Presentations are usually represented as slide decks. Videos of presentations can be uploaded as media.
While the robustness of the DNA origami method has enabled researchers to fabricate a large diversity of shapes, many design choices are made according to ad hoc rules and heuristics derived from limited empirical data. It would be beneficial to establish a quantitative physical basis for favoring one strand routing over another for a given shape. With these goals in mind, we have developed Cadnano Toolkit (CTK) and Molecular Dynamics Simulations of Self-Assembled DNA Nanostructures (MrDNA), a suite of programs to augment several aspects of the DNA origami design process.
SI2-SSE: Collaborative Research: Integrated Tools for DNA Nanostructure Design and Simulation
Directorate for Computer & Information Science & EngineeringFind out more...