R scripts documenting the statistical data analyses

R scripts documenting the statistical data analyses

The provided R scripts contain all code that was used for the main analyses steps of the study, and facilitates the reproduction of results presented in tables and figures. The scripts are numbered and named according to the analyses steps and correspond to the .html reports provided as additional files with the journal article.

Reference

Ingham AC, Kielsen K, Cilieborg MS, Lund O, Holmes S, Aarestrup FM, Müller KG, and Pamp SJ. (2019) Specific gut microbiome members are associated with distinct immune markers in pediatric allogeneic hematopoietic stem cell transplantation. Microbiome 7:131 https://doi.org/10.1186/s40168-019-0745-z