PhyloSift markers database
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
PhyloSift is a suite of software tools to conduct phylogenetic analysis of genomes and metagenomes.
Using a reference database of protein sequences, PhyloSift can scan new sequences against that database for homologs and identify the phylogenetic relationship of the new sequence to the database sequences. During this procedure, high quality alignments of codon and
amino acid sequence are generated.
Software Download on GitHub: https://github.com/gjospin/PhyloSift