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Phosphate leak in model with PPP.

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posted on 2013-12-05, 02:47 authored by Eduard J. Kerkhoven, Fiona Achcar, Vincent P. Alibu, Richard J. Burchmore, Ian H. Gilbert, Maciej Trybiło, Nicole N. Driessen, David Gilbert, Rainer Breitling, Barbara M. Bakker, Michael P. Barrett

Time course simulation of model B, in which the reactions of the glycosomal PPP are switched on at t = 0 by increasing their Vmax value from zero to the value given in Table S1. Glce is 5 mM and kTOX = 2 µl·min−1·mg protein−1. Solid lines indicate medians, shaded areas show interquartile ranges. Fluxes (J) are plotted on the left y-axis and are indicative of glucose uptake (GlcTplasma membrane), glycerol (GK) and pyruvate production (PyrT) and the two branches of pentose phosphate pathways (G6PDHc/g). The sum of bound phosphates in the glycosome (ΣPg), as exists in the model of glycolysis (Table 2, moiety 5), is plotted on the right y-axis. Within 25 minutes, all bound phosphates within the glycosome are depleted and all metabolic fluxes subsequently drop to zero.

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