Marine Microbial Eukaryotic Transcriptome Sequencing Project, re-assemblies

<div>The Marine Microbial Eukaryotic Transcriptome Sequencing Project (MMETSP) data set contains cultured samples of pelagic and endosymbiotic marine eukaryotic species representing more than 40 phyla (Keeling et al. 2014).</div><div><br></div><div>Each of these files is a de novo transcriptome assembly of one individual sequencing sample, defined by a unique SRR id. Files are named as follows:</div><div><br></div><div><b>Genus_species(SRA)_strain_SRR_MMETSP_alt_Genus_species(imicrobe).Trinity.fasta</b></div><div><br></div><div>Methods for the de novo transcriptome assembly are described in the Eel pond khmer protocols (Brown et al. 2015). Automated scripts are available on github: </div><div><br></div><div>https://github.com/ljcohen/MMETSP</div><div><br></div><div>C. Titus Brown, Camille Scott, and Leigh Sheneman. 2015. The Eel Pond mRNAseq Protocol. https://khmer-protocols.readthedocs.io/en/ctb/mrnaseq/</div>