MMnGM_processed_files.zip (4.33 MB)
MMnGM_processed_files.zip
Version 2 2018-11-21, 04:37
Version 1 2017-09-13, 19:13
dataset
posted on 2018-11-21, 04:37 authored by Karl BromanKarl BromanProcessed MegaMUGA and GigaMUGA (combined) SNP genotype data on the Collaborative Cross founders, for useful for preparing Diversity Outbred mouse genotypes for use with R/qtl2 (http://kbroman.org/qtl2)
MMnGM_allelecodes.csv: allele codes used for all SNPs
MMnGM_foundergeno*.csv: consensus genotypes for each of the 8 founder lines
MMnGM_gmap*.csv: Genetic map positions of the SNPs
MMnGM_info.csv: marker, chr, Mbp position, cM position, tier, and whether on GM and on MM arrays
MMnGM_pmap*.csv: Physical map positions (in Mbp) of the SNPs
