MM_processed_files.zip (2.6 MB)
MM_processed_files.zip
Version 2 2018-11-21, 04:37
Version 1 2017-09-13, 19:09
dataset
posted on 2018-11-21, 04:37 authored by Karl BromanKarl BromanProcessed MegaMUGA SNP genotype data on the Collaborative Cross founders, useful for preparing Diversity Outbred mouse genotypes for use with R/qtl2 (http://kbroman.org/qtl2)
MM_allelecodes.csv: allele codes used for all SNPs
MM_foundergeno*.csv: consensus genotypes for each of the 8 founder lines
MM_gmap*.csv: Genetic map positions of the SNPs
MM_info.csv: marker, chr, Mbp position, cM position, and tier
MM_pmap*.csv: Physical map positions (in Mbp) of the SNPs
