EB14JSim_UQ.pdf (1.18 MB)
JSim, an open-source modeling system for data analysis and reproducibility in research
poster
posted on 2014-06-03, 21:38 authored by Bart JardineBart Jardine, Gary Raymond, Erik Butterworth, Maxwell NealMaxwell Neal, James B BassingthwaighteJSim is a Java-based simulation system for building quantitative numeric models and analyzing them with respect to experimental reference data. JSim's primary focus is in physiology and biomedicine, however its computational engine is quite general and applicable to a wide range of scientific domains. JSim models may intermix ODEs, PDEs, implicit equations, integrals, summations, discrete events and procedural code as appropriate. JSim's model compiler can automatically insert conversion factors for compatible physical units as well as detect and reject unit unbalanced equations. JSim also imports and exports model archive formats SBML and CellML. This poster was presented at Experimental Biology 2014.
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- Bioinformatics and computational biology not elsewhere classified
- Agricultural biotechnology not elsewhere classified
- Animal physiology - biophysics
- Animal physiology - cell
- Animal physiology - systems
- Cardiology (incl. cardiovascular diseases)
- Medical biotechnology not elsewhere classified
- Biochemistry and cell biology not elsewhere classified
- Genetics not elsewhere classified
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