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Gene Expression Atlas of Schistosoma Mansoni - Part I

Version 2 2017-06-30, 12:12
Version 1 2017-04-20, 08:55
dataset
posted on 2017-06-30, 12:12 authored by Zhigang LuZhigang Lu, Florian Sessler, Nancy Holroyd, Steffen Hahnel, Thomas Quack, Matthew Berriman, Christoph G. GreveldingChristoph G. Grevelding
This data set (part I of two) was obtained from the RNA-Seq analysis of transcriptomes of adult Schistosoma mansoni and their gonads. All genes represented by transcripts identified in the analysis were given by their Smp numbers. In addition to the average transcript amounts (Reads per Kilobase Million (RPKM), Y-axis) and occurrence, log2 ratios were given as well as adjusted P values of pairing-, gender,- and tissue-related expression patterns.Custom codes to generate the data are given in a separate file.
Abbreviations used for the bar plots (X-axis) are:
bM (bisex males), paired males; sM (single-sex males), unpaired males; bF (bisex females), paired females; sF (single-sex females), unpaired females; bT, testis of bM; sT, testis of sM; bO, ovary of bM; sO, ovary of sO.

Funding

This work was supported by the Wellcome Trust, grants 107475/Z/15/Z (CGG, MB; FUGI) and 098051 (MB), and by a grant of the Deutsche Forschungsgemeinschaft (DFG), GR1549/7-2 (CGG). Zhigang Lu was a member of the International Giessen Graduate Centre for The Life Sciences (GGL) and received a fellowship from the China Scholarship Council (CSC).

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