figshare
Browse
gpu-acc.pdf (301.18 kB)

GROMACS 4.6 heterogenous CPU-GPU acceleration

Download (0 kB)
dataset
posted on 2014-03-23, 21:58 authored by Szilárd PállSzilárd Páll

Control and data-flow of the heterogeneus parallelization in GROMACS 4.6. The diagram illustrates both normal MD steps (black lines) as well as those steps in which the pair-search and domain-decomposition is carried out (blue). In the latter, the additional transfer of the pair list from the CPU to the GPU and a subsequent pruning done in the CUDA kernel is also indicated.

History

Usage metrics

    Licence

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC