Domestication of Campylobacter jejuni NCTC 11168
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
While the model organism allows basic comparison within and between labs, it is important to remember the effect even small differences in isolate genomes can have on the validity and reproducibility of experimental work. We quantify differences in 23 reference Campylobacter genomes and compare them with observable differences in common laboratory phenotypes.
Table S1: Isolate list
Table S2: Isolates used for genomic context
File S1: wgMLST output for all isolates
File S2: Alignment file: NCTC11168 isolates only.
File S3: Alignment file: NCTC11168 isolates and 83 previously published genomes.
File S4: SNP matrix
File S5: Summary of Gubbins output.