Box Plot CAI all sites all domains.png (108.66 kB)
Box Plot of CAI by Sample Site and Domain
Data set from Reddy et al 2012, SRR342214. AD, KS, KSa desert soil sequences were mined from the sra file. Fragments of less then 150 base pairs were removed. CodonW was used to calculate all codon bias indices.
AB - California, AZ - Arizona, UT - Utah
Condonw command: ./codonw yourfile.fasta -all_indices -c_type 2 -f_type 4 -nomenu -silent
