GC vs Genome Size Bacteria Euryarchaeota Genomes April 2014.pdf (361.23 kB)
Bacteria and Euryarchaeota Genome Size and GC Content
Version 2 2014-05-10, 23:36
Version 1 2014-05-10, 18:51
figure
posted on 2014-05-10, 18:51 authored by Ara KooserAra KooserApril 2014, NCBI Bacterial and Euryarchaeota completed genomes. GC content plotted against genome size.
n = 2969
Bayesian Correlation on the same data is here:
http://figshare.com/articles/Bayesian_First_Aid_Pearson_s_Correlation_Coefficient_Test_on_Completed_Bacterial_and_Euryarchaeota_Genomes_April_2014_data_set/1022802
The R script that generated this analysis is available here:
https://github.com/bioinfonm/2ndmeta/blob/master/R%20Scripts/gc%20content%20genome%20size/gc%20content%20genome%20size%20bacteria.R
The raw data is available from NCBI here:
ftp://ftp.ncbi.nlm.nih.gov/genomes/GENOME_REPORTS/prokaryotes.txt