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GC vs Genome Size Bacteria Euryarchaeota Genomes April 2014.pdf (361.23 kB)

Bacteria and Euryarchaeota Genome Size and GC Content

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Version 2 2014-05-10, 23:36
Version 1 2014-05-10, 18:51
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posted on 2014-05-10, 18:51 authored by Ara KooserAra Kooser

April 2014, NCBI Bacterial and Euryarchaeota completed genomes. GC content plotted against genome size. 

n = 2969

Bayesian Correlation on the same data is here:

http://figshare.com/articles/Bayesian_First_Aid_Pearson_s_Correlation_Coefficient_Test_on_Completed_Bacterial_and_Euryarchaeota_Genomes_April_2014_data_set/1022802

The R script that generated this analysis is available here:

https://github.com/bioinfonm/2ndmeta/blob/master/R%20Scripts/gc%20content%20genome%20size/gc%20content%20genome%20size%20bacteria.R

The raw data is available from NCBI here:

ftp://ftp.ncbi.nlm.nih.gov/genomes/GENOME_REPORTS/prokaryotes.txt

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