Figure 5.TIF (1.04 MB)

Amino acids at sites with positive selection for change on the cagA phylogenetic tree.

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posted on 2011-08-11, 13:38 authored by Yoshikazu Furuta, Koji Yahara, Masanori Hatakeyama, Ichizo Kobayashi

The tree is based on nucleotide sequences of the entire gene. Each codon number refers to those in strain 26695. (A) 82nd codon. (B) 634th codon. (C) 910th codon. (D) 911th codon. (E) 989th codon. (F) 1111th codon. (G) 1160th codon.

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Recombination Helicobacter pylori CagA Western type EPIYA Amerind type EPIYA DNA sequence level EPIYA host-interacting motif DNA sequences host cell kinases cagA gene product EPIYA-D half EPIYA segment types CM variant recombination

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