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12859_2016_904_MOESM6_ESM.scala (1.04 kB)

Additional file 6 of GenAp: a distributed SQL interface for genomic data

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posted on 2016-02-04, 05:00 authored by Christos Kozanitis, David Patterson
This is sample code that uses Spark SQL to perform an interval based join to the contents of sampleReads.adam with the contents of Additional File 5. (SCALA 1 kb)

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NIH Clinical Center (US)

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    BMC Bioinformatics

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    Keywords

    NGSGenomicsBig dataSQLInteractiveApache sparkDistributedKozanitisPatterson

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    CC BY + CC0

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