Additional file 6: Figure S1. of Structure and variation of CRISPR and CRISPR-flanking regions in deleted-direct repeat region Mycobacterium tuberculosis complex strains

Visualization of mid IS6110 orientation: blue for wild type (as in reference H37Rv) or for unknown orientation; red for inverse orientation (see Table 1). DR plus flanking sequences were aligned to DR and flanking regions of reference template H37Rv. Sequences were from Mycobacterium tuberculosis NGS read sets generated in this study (patients A, B, and C corrected by manual PCR; and T3_Eth), on-line resources of read sets, mapped on H37Rv NC_000962.3, and on-line resources of complete chromosome sequences. (PPT 481 kb)