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Additional file 5: of Efficient and biologically relevant consensus strategy for Parkinson’s disease gene prioritization

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posted on 2016-03-09, 05:00 authored by Maykel Cruz-Monteagudo, Fernanda Borges, Cesar Paz-y-Miño, M. Cordeiro, Irene Rebelo, Yunierkis Perez-Castillo, Aliuska Helguera, Aminael Sánchez-Rodríguez, Eduardo Tejera
1) Results of the Limma prioritization for the top 1016 genes with uncorrected p-values < 0.05. 2) Results of the gene ontology (biological process) enrichment analysis for the top 134 genes prioritized with Limma with FDR corrected p-values < 0.05. 3) Results of the gene ontology (biological process) enrichment analysis for the top 1016 genes prioritized with Limma with uncorrected p-values < 0.05. 4) List of the 168 genes prioritized with machine learning. 5) Results of the gene ontology (biological process) enrichment analysis for the 168 genes prioritized with machine learning. 6) Results of the gene ontology (biological process) enrichment analysis for the 1437 genes included in the co-expression module PD_02. 7) Results of the gene ontology (biological process) enrichment analysis for the 494 genes included in the co-expression module PD_07. 8) Results of the ToppCluster combined enrichment analysis for the co-expression modules PD_02 and PD_07. 9) Results of the gene ontology (biological process) enrichment analysis for the 50 genes prioritized with the consensus strategy and 100 additional interacting genes included in the STRING functional interaction network. (XLSX 493 kb)

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Fundação para a Ciência e a Tecnologia (PT)

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