Additional file 3: Table S3. of Public health surveillance in the UK revolutionises our understanding of the invasive Salmonella Typhimurium epidemic in Africa

The antimicrobials used for susceptibility testing in this study. Figure S1. Isolate U60 contains additional resistance genes including a bla CTX-M-15 locus inserted into the chromosomal ompD locus. Figure S2. Circular representation of finished genome of UK-ST313 representative strain U2, showing the chromosome and the pSLT-U2 virulence plasmid. Figure S3. Fully labelled phylogenetic tree highlighting the context of subset of 16 UK-isolated ST313 strains included in phenotypic testing. Figure S4. The maximum clade credibility tree from BEAST showing the timed phylogeny of all ST313 isolated in this study and a representative sub-sample of African ST313 from Okoro et al. [7]. Figure S5. Distribution of pairwise SNP distances of lineage 2 ST313 and UK-ST313. (PDF 1193 kb)