Additional file 1 of ToPASeq: an R package for topology-based pathway analysis of microarray and RNA-Seq data

Supplementary material.pdf. The file contains additional details on the following: i) common principles of the multivariable and univariable topology-based methods; ii) the functions for pathway creation and manipulation (desciption as well as demostration); iii) comparison of ToPASeq with existing tools. (1013 Kb)