Additional file 1: of Hierarchical genomic analysis of carried and invasive serogroup A Neisseria meningitidis during the 2011 epidemic in Chad

Supplemental Figures and Tables. Description of Data: Supplemental Figures and Tables referred to in the main manuscript and the data and discussion generated from the comparison between the velvet/VelvetOptimiser and Spades assembly methods. Figure S1. Deletion of six genes in isolate 120–2011. Figure S2. Geographical location of the NmA isolates. Figure S3. wgMLST relationship of the NmA:cc5 isolates. Figure S4. wgSNP relationship of the 23 Chadian NmA from their original fastq files. Table S1. Velvet assembly statistics. Table S2. ID and characteristics of cc5 NmA isolated in previous studies. Table S3. Velvet/VelvetOptimiser and Spades assembly statistics. (DOCX 699 kb)