40793_2016_201_MOESM1_ESM.pdf (262.24 kB)
Additional file 1: Figure S1. of Draft genome sequence of the marine Rhodobacteraceae strain O3.65, cultivated from oil-polluted seawater of the Deepwater Horizon oil spill
journal contribution
posted on 2016-10-13, 05:00 authored by Helge-Ansgar Giebel, Franziska Klotz, Sonja Voget, Anja Poehlein, Katrin Grosser, Andreas Teske, Thorsten BrinkhoffEnrichment culture of surface seawater contaminated with weathered oil (slicks) from the Deepwater Horizon (DWH) oil spill with oil and oilâwater phase. From the latter, indicated by an arrow, Rhodobacteraceae strain O3.65 was isolated. Table S1. Dissimilarity (%) based on 16S rRNA gene sequence comparison 29 and in silico DNA-DNA hybridization (DDH) of strain O3.65 using 16S rRNA gene sequences and genomes of (typeT31) strains of the genera Phaeobacter, Pseudophaeobacter, Leisingera, Ruegeria and other relevant strains. The neighbor-joining distance matrix tool of the ARB software was used for calculation of 16S rRNA gene similarity. DDH was done using the genome to genome distance calculator (GGDC 2.0, DSMZ, http://ggdc.dsmz.de/distcalc2.php , [77, 78]) and represents values of the recommended formula 2 [79]. Table sorted by increasing dissimilarity. (PDF 262Â kb)