Additional file 17: Figure S11. of Recent urbanization in China is correlated with a Westernized microbiome encoding increased virulence and antibiotic resistance genes

Taxa more abundant in urban samples have more genes than taxa that are more abundant in rural samples. For each OTU, the number of annotated genes in the closest finished genome in NCBI (Fig. 2c) was counted. The P value is from a t test comparing the 80 OTU consensus sequences with higher relative abundance in rural samples to the 91 OTUs with higher relative abundance in urban samples. (TIFF 5273 kb)