Additional file 12: Figure S5. of Cnidaria: fast, reference-free clustering of raw and assembled genome and transcriptome NGS data

Heatmaps of Jaccard distance and phylogenetic trees from 135 samples using 21-mers. Here, 0 (red) means identity between samples while 1 (blue) means no identity. Generally, closely related species show high similarity with closely related species and no similarity with outgroups. This leads to strong clustering inside groups but loose coupling between groups. Trees in the left shows phylogenetic distances while trees in the right ignores the distances, showing the clustering more clearly; trees plotted using iTOL [85]. (PDF 1303 kb)