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A three-dimensional thalamocortical dataset for characterizing brain heterogeneity: X-ray microCT images (Tiff)

dataset
posted on 2020-04-20, 02:31 authored by Judy PrasadJudy Prasad, Aishwarya BalwaniAishwarya Balwani, Erik JohnsonErik Johnson, Joseph MianoJoseph Miano, Konrad Paul Kording, Chris Jacobsen, Kamel Fezzaa, Vincent De Andrade, Rafael Vescovi, Narayanan Kasthuri, Eva DyerEva Dyer
This dataset consists of a collection of images acquired from multiple brain regions that span an intact thalamocortical pathway (Agmon & Connors, 1991). The data was acquired using synchrotron X-ray microCT at 1.17 micron isotropic resolution. The full image volume is 1420 x 5805 x 720 pixels. The 720 images are split into 8 subvolumes, each containing 90 images. The images in each subvolume are stored as multipage tiffs in 8-bit format.

Microstructure annotations associated with this dataset can be found at this doi:10.6084/m9.figshare.12153516.v1

Region level annotations associated with this dataset can be found at this doi:10.6084/m9.figshare.12153549.v1

Funding

NSF IIS-1755871

NIH 1R24MH114799-01

Sloan Research Fellowship in Neuroscience

Argonne National Laboratory Contract No. DE-AC02-06CH11357

NIMH R24MH114785

NIMH U01 MH109100

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