10.6084/m9.figshare.8003777.v2
Tinashe Chabikwa
Tinashe
Chabikwa
Francois Barbier
Francois
Barbier
Milos Tanurdzic
Milos
Tanurdzic
Christine Beveridge
Christine
Beveridge
Mango Transcriptome Assembly
figshare
2019
gene discovery
mango
Normalized libraries
de novo assembly of RNA-seq
gene annotations
Plant Developmental and Reproductive Biology
Plant Cell and Molecular Biology
2019-06-19 14:09:23
Dataset
https://figshare.com/articles/dataset/Mango_Transcriptome_Assembly/8003777
This mango transcriptome assembly was derived from pooled leaf, stem, bud, root,
floral and fruit tissue. Using normalized cDNA libraries, we generated comprehensive
RNA-Seq datasets using the Illumina NextSeq 500 platform. 82198 of mango unigenes were generated and functionally annotated using
a combination of <i>de novo</i>
transcriptome assembly, redundancy reduction and Basic Local Alignment Search
Tool (BLAST) searches to the Universal Protein Resource UniProtKB/Swiss-Prot
database.