%0 Generic %A Chabikwa, Tinashe %A Barbier, Francois %A Tanurdzic, Milos %A Beveridge, Christine %D 2019 %T Avocado Transcriptome Assembly %U https://figshare.com/articles/dataset/Avocado_Transcriptome_Assembly/8003762 %R 10.6084/m9.figshare.8003762.v2 %2 https://ndownloader.figshare.com/files/14906945 %2 https://ndownloader.figshare.com/files/14906969 %2 https://ndownloader.figshare.com/files/14947391 %2 https://ndownloader.figshare.com/files/15543929 %K Avocado %K De Novo Transcriptomes %K gene discovery %K normalized libraries %K RNA-Sequencing %K Plant Cell and Molecular Biology %K Plant Developmental and Reproductive Biology %X

Avocado transcriptome assembly from pooled leaf, stem, bud, root, floral and fruit tissue. Using normalized cDNA libraries, we generated comprehensive RNA-Seq datasets using the Illumina NextSeq 500 platform. 63420 of avocado unigenes respectively were generated and functionally annotated using a combination of de novo transcriptome assembly, redundancy reduction and Basic Local Alignment Search Tool (BLAST) searches to the Universal Protein Resource UniProtKB/Swiss-Prot database.

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