TY - DATA T1 - Improvement of TCIFPnative. PY - 2013/07/16 AU - Nobuyuki Uchikoga AU - Yuri Matsuzaki AU - Masahito Ohue AU - Takatsugu Hirokawa AU - Yutaka Akiyama UR - https://plos.figshare.com/articles/figure/_Improvement_of_TCIFP_native_/746141 DO - 10.1371/journal.pone.0069365.g003 L4 - https://ndownloader.figshare.com/files/1119782 KW - Biochemistry KW - proteins KW - Globular proteins KW - Protein interactions KW - protein structure KW - biophysics KW - Biophysics simulations KW - Biophysics theory KW - Computational biology KW - Macromolecular structure analysis KW - Biophysic al simulations KW - proteomics N2 - Example shown here is for the protein complex between cytochrome c and cytochrome c peroxidase (PDB-id 2PCC). Near-native P-IFPs were obtained for this complex as described in Materials and Methods. This plot shows no near-native decoys in the H6–T6 threshold group. Energy score of P-IFP is defined as the lowest energy of the decoy. Closed circles: 2000 generated decoys, crosses: core decoys, and open circles: P-IFPs. ER -