%0 Generic
%A Edskes, Herman K.
%A Mukhamedova, Maryam
%A Edskes, Bouke K.
%A Wickner, Reed B.
%D 2018
%T Supplemental Material for Edskes et al., 2018
%U https://gsajournals.figshare.com/articles/dataset/Supplemental_Material_for_Edskes_et_al_2018/6205691
%R 10.25386/genetics.6205691.v1
%2 https://ndownloader.figshare.com/files/11283053
%2 https://ndownloader.figshare.com/files/11283044
%2 https://ndownloader.figshare.com/files/11283047
%2 https://ndownloader.figshare.com/files/11283041
%2 https://ndownloader.figshare.com/files/11283056
%2 https://ndownloader.figshare.com/files/11283050
%K LUG1/YLR352W
%K F-box protein
%K Ure2p
%K nitrogen catabolite repression
%K Hap4p
%K prion
%K URE3
%K gln1
%K Genetics
%X Supplemental Methods_figures_tables.pdf - Provides a detailed description of the culture conditions,
induction of Hermes transposition,
selection of colonies carrying a transposition, extraction of cellular DNA, PCR
amplification and isolation of the junction points between transposon and
chromosomal insertion site, next-generation sequencing of these sites, and
analysis of the data by visual display and by counting insertions per open
reading frame.
Exon Intron Counts.xlsx - Gives the insertions in
every yeast open reading frame, distinguishing exons from introns where
appropriate.
Sorted Hits.xlsx - Gives prominent hits sorted by functional
group, “TY gag-pol Counts.xlsx comparing insertions in the Ty retrotransposons
at different locations in the genome.
Count Insertions in ORFs and
Introns.txt - The Python program used for counting insertions.
LUGsIGV-InsertDistributions.pptx - Is a slide show of insert distributions in
each of 500 genes for which insertions were recovered more frequently in
[ure-o] than in [URE3] cultures.
%I GSA Journals