TY - DATA T1 - Protist Ribosomal Reference database (PR2) - SSU rRNA gene database PY - 2018/03/08 AU - Daniel Vaulot AU - Laure Guillou UR - https://figshare.com/articles/dataset/Protist_Ribosomal_Reference_database_PR2_-_SSU_rRNA_gene_database/5913181 DO - 10.6084/m9.figshare.5913181.v4 L4 - https://ndownloader.figshare.com/files/10684426 L4 - https://ndownloader.figshare.com/files/10684801 L4 - https://ndownloader.figshare.com/files/10685452 L4 - https://ndownloader.figshare.com/files/10684792 L4 - https://ndownloader.figshare.com/files/10685455 L4 - https://ndownloader.figshare.com/files/10684429 L4 - https://ndownloader.figshare.com/files/10689223 KW - rRNA KW - mothur KW - microalgae KW - phytoplankton KW - reference sequences KW - protists KW - eukaryotes KW - metabarcoding KW - SSU rRNA KW - Ecology N2 - The Protist Ribosomal Reference database (PR2) provides a unique access to eukaryotic small sub-unit (SSU) ribosomal RNA and DNA sequences, with curated taxonomy. The database mainly consists of nuclear-encoded protistan sequences. However, metazoans, land plants, macrosporic fungi and eukaryotic organelles (mitochondrion, plastid and others) are also included because they are useful for the analysis of high-troughput sequencing data sets. Introns and putative chimeric sequences have been also carefully checked. Taxonomic assignation of sequences consists of eight unique taxonomic fields.The database is now synchronized on Github for easier maintenance.Home pagehttps://github.com/vaulot/pr2_databaseLatest version of fileshttps://github.com/vaulot/pr2_database/releasesInformationhttps://github.com/vaulot/pr2_database/wikiReports problems and bugshttps://github.com/vaulot/pr2_database/issuesContactDaniel VAULOT, Laure GUILLOU and Fabrice NOTDIPO team, Plankton Group, UMR 7144 CNRS-UPMCStation Biologique,Place G. Tessier29680 Roscoff FRANCEemail: vaulot@sb-roscoff.frPlease citeGuillou, L., Bachar, D., Audic, S., Bass, D., Berney, C., Bittner, L., Boutte, C. et al. 2013. The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy. Nucleic Acids Res. 41:D597–604.The PhytoRef (16S plastid database) is available here : https://figshare.com/articles/PhytoREF_a_reference_database_of_the_plastidial_16S_rRNA_gene_of_photosynthetic_eukaryotes_with_curated_taxonomy/4689826 ER -