10.6084/m9.figshare.5788626.v1
Val Lanza
Val
Lanza
Fernando Baquero
Fernando
Baquero
José Martínez
José
Martínez
Ricardo Ramos-Ruíz
Ricardo
Ramos-Ruíz
Bruno González-Zorn
Bruno
González-Zorn
Antoine Andremont
Antoine
Andremont
Antonio Sánchez-Valenzuela
Antonio
Sánchez-Valenzuela
Stanislav Ehrlich
Stanislav
Ehrlich
Sean Kennedy
Sean
Kennedy
Etienne Ruppé
Etienne
Ruppé
Willem van Schaik
Willem
van Schaik
Rob Willems
Rob
Willems
Fernando de la Cruz
Fernando
de la Cruz
Teresa Coque
Teresa
Coque
Additional file 5: of In-depth resistome analysis by targeted metagenomics
Springer Nature
2018
Antimicrobial resistance
Resistome
Metagenomics
Differential abundance analysis
Targeted metagenomics
2018-01-15 05:00:00
Journal contribution
https://springernature.figshare.com/articles/journal_contribution/Additional_file_5_of_In-depth_resistome_analysis_by_targeted_metagenomics/5788626
MGC abundance comparison of antibiotic resistance between swine and human samples. MGCs corresponding to the antibiotic resistance dataset were classified by antibiotic families (Agly: aminoglycosides, Bla: betalactams, Flq: fluoroquinolones, Gly: glycopeptides, MLS: macrolides, Phe: phenicols, Sul: sulfonamides, Tet: tetracyclines, Tmt: trimethoprim). Abundance was measured as read per kilobase per million reads. The right panel shows the results of MSS, and the left panel shows the results of ResCap. (PDF 533 kb)