%0 Generic
%A Bailes, Emily
%A Deutsch, Kaitlin R
%A Bagi, Judy
%A Rondissone, Lucila
%A Brown, Mark
%A Lewis, Owen T
%D 2018
%T First detection of bee viruses in hoverfly (syrphid) pollinators: Supporting data - accepted subject to minor revision in Biology Letters (2018)
%U https://royalholloway.figshare.com/articles/dataset/First_detection_of_bee_viruses_in_hoverfly_syrphid_pollinators_Supporting_data/5706154
%R 10.17637/rh.5706154.v2
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%K BQCV
%K SBV
%K ABPV
%K DWV-B
%K VDV
%K SBPV
%K Bee virus
%K Honey bee
%K Honeybee
%K Apis mellifera L
%K hoverfly Episyrphus balteatus
%K hoverfly (Eristalis)
%K Platycheirus albimanus
%K Eristalis arbustorum
%K Eristalis tenax
%K hover fly
%K Ecology not elsewhere classified
%K Host-Parasite Interactions
%K Infectious Diseases
%K Virology
%X Supporting data for "First detection of bee viruses in hoverfly (syrphid) pollinators" (accepted subject to minor revisions in Biology Letters, 2018)
Bailesetal_HoverflyScreening.xlsx
Information on the samples screened for viruses and the viruses detected and the NCBI sequences relating to individual samples
Bailesetal_qRTPCR.xlsx
qRT-PCR data for SBV and BQCV titres, including Ct values, in honey bees and hoverflies
Bailesetal code.R
R code used for analysing differences in viral titres and viral presence/absence between honey bees and hoverflies
Bailesetal_SBV-clustal-alignment.txt
Alignment of SBV sequences from Clustal Omega
Bailesetal_BQCV-clustal-alignment.txt
Alignment of BQCV sequences from Clustal Omega
.abi files
Sequences traces are named SeqID_Virus_SampleID.abi - NVBI seqeuence IDs that relate to the sequencing trace are given in Bailesetal_HoverflyScreening.xlsx
- The higher quality 3' end of S1_SBV_Am7_2_3primeend.ab1
was used to extend the sequence of S15_SBV_Am7_2.ab1
- Sequence B9B_BQCV_Ea20_pGEM.ab1 is cloned into pGEM and sequenced from the M13F site, it is in reverse orientation.
%I Royal Holloway, University of London