Outline of the algorithm to compute Collagen Alignment Index (CAI).
Cemal Cagatay Bilgin
Amanda W. Lund
Ali Can
George E. Plopper
Bülent Yener
10.1371/journal.pone.0012783.g007
https://plos.figshare.com/articles/_Outline_of_the_algorithm_to_compute_Collagen_Alignment_Index_CAI_/497814
<p>After segmenting the nuclei, cell-graph are built capturing the spatial distribution. Voronoi diagrams are built and the gradient vectors in each Voronoi compartment are calculated. A distribution of the angles between the cell-graph edges and the gradient vectors is calculated to find the CAI metric.</p>
2013-02-20 23:09:27
algorithm
compute
collagen
alignment