10.6084/m9.figshare.c.3685393_D6.v1
Paul Daly
Paul
Daly
Jolanda Munster
Jolanda
Munster
Martin Blythe
Martin
Blythe
Roger Ibbett
Roger
Ibbett
Matt Kokolski
Matt
Kokolski
Sanyasi Gaddipati
Sanyasi
Gaddipati
Erika Lindquist
Erika
Lindquist
Vasanth Singan
Vasanth
Singan
Kerrie Barry
Kerrie
Barry
Anna Lipzen
Anna
Lipzen
Chew Ngan
Chew
Ngan
Christopher Petzold
Christopher
Petzold
Leanne Chan
Leanne
Chan
Steven Pullan
Steven
Pullan
StĂŠphane Delmas
StĂŠphane
Delmas
Paul Waldron
Paul
Waldron
Igor Grigoriev
Igor
Grigoriev
Gregory Tucker
Gregory
Tucker
Blake Simmons
Blake
Simmons
David Archer
David
Archer
MOESM13 of Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments
Springer Nature
2017
Aspergillus niger
Lignocellulose
Ionic liquid and hydrothermal pretreatments
Straw
Transcriptomic responses
CAZy
Hemicellulose
RNA-seq
Targeted proteomics
2017-02-07 05:00:00
Dataset
https://springernature.figshare.com/articles/dataset/MOESM13_of_Expression_of_Aspergillus_niger_CAZymes_is_determined_by_compositional_changes_in_wheat_straw_generated_by_hydrothermal_or_ionic_liquid_pretreatments/4629283
Additional file 13: Table S10. CAZy, transcription factor and sugar transporter content of MFuzz clusters from the ILS time-course. File with lists of genes from each cluster from the ILS time-course of all genes from the categories of CAZy, Pfam for sugar transporters and Pfam for transcription factors that met selection criteria. Only genes strongly associated with a clusterâs predominant expression profile (membership value > 0.5 as well as an FPKM > 10 at the clusterâs expression peak) were selected which led to the capture of between a half and a third of each category.