10.6084/m9.figshare.c.3685393_D6.v1 Paul Daly Paul Daly Jolanda Munster Jolanda Munster Martin Blythe Martin Blythe Roger Ibbett Roger Ibbett Matt Kokolski Matt Kokolski Sanyasi Gaddipati Sanyasi Gaddipati Erika Lindquist Erika Lindquist Vasanth Singan Vasanth Singan Kerrie Barry Kerrie Barry Anna Lipzen Anna Lipzen Chew Ngan Chew Ngan Christopher Petzold Christopher Petzold Leanne Chan Leanne Chan Steven Pullan Steven Pullan Stéphane Delmas Stéphane Delmas Paul Waldron Paul Waldron Igor Grigoriev Igor Grigoriev Gregory Tucker Gregory Tucker Blake Simmons Blake Simmons David Archer David Archer MOESM13 of Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments Springer Nature 2017 Aspergillus niger Lignocellulose Ionic liquid and hydrothermal pretreatments Straw Transcriptomic responses CAZy Hemicellulose RNA-seq Targeted proteomics 2017-02-07 05:00:00 Dataset https://springernature.figshare.com/articles/dataset/MOESM13_of_Expression_of_Aspergillus_niger_CAZymes_is_determined_by_compositional_changes_in_wheat_straw_generated_by_hydrothermal_or_ionic_liquid_pretreatments/4629283 Additional file 13: Table S10. CAZy, transcription factor and sugar transporter content of MFuzz clusters from the ILS time-course. File with lists of genes from each cluster from the ILS time-course of all genes from the categories of CAZy, Pfam for sugar transporters and Pfam for transcription factors that met selection criteria. Only genes strongly associated with a cluster’s predominant expression profile (membership value > 0.5 as well as an FPKM > 10 at the cluster’s expression peak) were selected which led to the capture of between a half and a third of each category.