Hierarchical clustering of differential expressed genes in the datasets.
Kumaraswamy Naidu Chitrala
Prakash Nagarkatti
Mitzi Nagarkatti
10.1371/journal.pone.0168404.g002
https://plos.figshare.com/articles/figure/Hierarchical_clustering_of_differential_expressed_genes_in_the_datasets_/4485383
<p>(A) Represents PTSD<sub>GSE860</sub> (yellow) vs Post-deploy PTSD<sub>GSE63878</sub> (red) condition (B) Represents PTSD<sub>GSE860</sub> (red) vs Pre-deploy PTSD<sub>GSE63878</sub> (orange) vs Post-deploy PTSD<sub>GSE63878</sub> (red) condition. All the probes were clustered based on normalized signal intensity ratios. Each row represented a single gene; each column represents the samples in each condition with an average linkage of expression.</p>
2016-12-20 19:00:54
Post-deploy PTSD condition
RP
Peripheral Blood Mononuclear Cells
GSE 63878 dataset
2B
63 PTSD samples
Post-Traumatic Stress Disorder Post-traumatic stress disorder
PR
interaction network analysis
SEC 14L
MetaDE package
62 control samples
gene ontology analysis
MOBP
GSE 860 dataset
DNA
SR
PPBPP
Novel Pathways Conferring Risk
IL 15
SOX
AW
PTPRK