TY - DATA T1 - Additional file 2 of Integrative DNA methylation and gene expression analysis to assess the universality of the CpG island methylator phenotype PY - 2015/10/13 AU - Matahi Moarii AU - Fabien Reyal AU - Jean-Philippe Vert UR - https://springernature.figshare.com/articles/journal_contribution/Additional_file_2_of_Integrative_DNA_methylation_and_gene_expression_analysis_to_assess_the_universality_of_the_CpG_island_methylator_phenotype/4474784 DO - 10.6084/m9.figshare.c.3646286_D5.v1 L4 - https://ndownloader.figshare.com/files/7204688 KW - PDF 381 kb KW - CGI KW - CIMP clusters KW - CIMP signature KW - gene expression analysis KW - Integrative DNA methylation KW - CpG island methylator phenotype Stability KW - panel N2 - Stability of CIMP clusters with respect to the size of the CIMP signature. Robustness of cluster assignment for each sample (columns) as a function of the proportion of variant CGIs kept to define the CIMP signature, from 1 to 10 % (rows) and given the number of CIMP clusters considered (left panels: K = 2, right panels: K = 3, yellow = CIMP-positive, blue = CIMP-negative, black = CIMP-low) for bladder (panel A/B), breast (panel C/D), colon (panel E/F), lung (panel G/H), stomach (panel I/J). Panel K. Table summarizing the stability of the cluster assignments for each tissue and different number of CIMP clusters considered. (PDF 381 kb) ER -